Browse of TCMCG006C12859 protein

CDS

Accession Number	TCMCG006C12859
gbkey	CDS
Protein Id	XP_022563781.1
Location	join(41673580..41673920,41674071..41674231,41674457..41674696,41674802..41674911,41675003..41675080,41675168..41675274,41675561..41675652,41675736..41675860,41675943..41676046,41676128..41676199,41676307..41676385,41676481..41676649,41676747..41676817,41677136..41677216,41677290..41677360,41677438..41677534,41677778..41677837,41677954..41678008,41678103..41678500,41678574..41678976,41678979..41680279,41680359..41680934,41681248..41681306,41681389..41681584)
Gene	LOC106382507
GeneID	106382507
Organism	Brassica napus

Protein

Length	1682aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_022708060.1
Definition	LOW QUALITY PROTEIN: bromodomain and WD repeat-containing protein 1-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Bromodomain
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K11797        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006325        [VIEW IN EMBL-EBI] GO:0006355        [VIEW IN EMBL-EBI] GO:0006357        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0007010        [VIEW IN EMBL-EBI] GO:0007154        [VIEW IN EMBL-EBI] GO:0007165        [VIEW IN EMBL-EBI] GO:0007166        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008360        [VIEW IN EMBL-EBI] GO:0009889        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0010468        [VIEW IN EMBL-EBI] GO:0010556        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0019219        [VIEW IN EMBL-EBI] GO:0019221        [VIEW IN EMBL-EBI] GO:0019222        [VIEW IN EMBL-EBI] GO:0022603        [VIEW IN EMBL-EBI] GO:0022604        [VIEW IN EMBL-EBI] GO:0023052        [VIEW IN EMBL-EBI] GO:0031323        [VIEW IN EMBL-EBI] GO:0031326        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0034097        [VIEW IN EMBL-EBI] GO:0038111        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051128        [VIEW IN EMBL-EBI] GO:0051171        [VIEW IN EMBL-EBI] GO:0051252        [VIEW IN EMBL-EBI] GO:0051276        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0060255        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0065008        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0070887        [VIEW IN EMBL-EBI] GO:0071310        [VIEW IN EMBL-EBI] GO:0071345        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0080090        [VIEW IN EMBL-EBI] GO:0098760        [VIEW IN EMBL-EBI] GO:0098761        [VIEW IN EMBL-EBI] GO:1903506        [VIEW IN EMBL-EBI] GO:2000112        [VIEW IN EMBL-EBI] GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCTCTTAGGAAAAACACTCCGAAAGCTGATTCAGTCTCTCTCCCTATGAAGCCTTTGAATTTTTCCAGAAAATTGCCAGGGAATGACCCAGATATTGCTCAAGATGTTGTGCGGCGTAACATTGATTTGGACCAGCGGGAAGTTTACTTTCTGATGCTCCACTTACTTTCCTCTGGGCCTTGCCAAAGAACTTATGCGCTGTTGCGACATGAACTTCTTGAACATGAGCTTCTTCCTAGAAGATATCATGCTTGGTACTCGAGGAGTGGATTGCCTAGCGGGGATGAGAATGATGATGGAAACTCCTTTCCTTTAGACTATGCTGAGTTGGCTAAGAGGTATTCTCACGTAAAAAGAGATCACTTGGTGGAGCTTCTGAAGCAATTGGTCTTTGTTTCAAGTAGGCCTACTCCCTCACGAGGGCTTGCTGATGGAAATAAACTAGTTACAGCTGGTGTCCCAACGCTTTTAGGGACTGGATCGTTCCCCCTCTTGAGCTACGACAAGGACATAGTTGGAAGTGATCTCAAGCCACCACCTATAGGGATGCGTTGGCCTCATATGCATGCTGATCAGGTGCGTGGTTTAAGTTTGAGAGAAATTGGTGGTGGTTTTGCCAGACATCATCGAGCCCCATCAATTCGTGCAGCATGCTATGTCATTGTAAAACCATCTACAATGGTACAAAAGATGCAGAACATCAAGAGGCTACGTGGACACAGAAACGCTGTGTACTGTGCTATACTTGACCGCTCAGGAAGGTATGTAATCACTGGTTCAGATGATCGCCTTGTAAAAGTATGGTCAATGGAGACTGCATACTGCCTGGCCAGCTGTCGAGGGCATGAAGGTGACATAACTGATCTTGCTGTGAATTCGAACAACACTTTCATAGCATCCGCTTCAAATGATTGTGTGATCCGTGTTTGGCGATTGCCAGATGGTTTACCAGTTTCGGTACTTCGTGGACATATTGGAGCTATTACTGCCATTGCATTTAGTCCCAGGCCTGGATCCCCGTACCAACTTCTTTCATCGTCGGATGATGGTACATGCAGGATATGGGATGCTCGGGGTGCCCAATTTGCTCCACGGATATATGTCCCTAGGCCTCCTAGTCCTGATGGGAAGAACGATGGCCCTTCTTCTAGTGACGCTCAGCAGAGTCACCAAATTTTTTCCTGTGCATTCAATGCCAGTGGATCTGTCTTTGTCACTGGTAGCTCTGACACTCTTGCCAGAGTATACTCGGTTTGGAGTGCTAGTAGGATCAGTAATGATGACCCAGAGCAGCCAAATCATGAGATGGATGTTTTGGCTGGACATGAGAATGATGTTAATTATGTTCAGTTCAGTGGTTGTGCTGCAGGATCTAAATTTGCCGACTACTCAAAAGACGATAGTGTTCCAAAATTTAAGAGCTCCTGGTTCTGTCATGATAACATAGTTACATGCTCTCGTGATGGTAGTGCAATCATTTGGATCCCAAGATCTCGGAGATCACATGGAAAAAGCTACCGATGGACACGAGCATATCATCTCAAGGTTCCACCTCCGCCCATGCCTCCTCAACCCCCTAGAGGTGGGCCACGTCAAAGGATCCTGCCTACTCCCCGTGGGGTTAACATGATTGCTTGGAGTCTGGATAATCGTTTTGTCCTTGCCGCTATCATGGATTGTAGAATATGCGTGTGGAATGCCTCTGATGGTAGCTTGGTACATTCTTTAACTGGCCATACAGCATCTACATATGTTATGGACGTCCATCCTTTCAATCCTCGGATAGCTATGAGTGCTGGCTATGATGGAAAAACAATAGTGTGGGATATATGGGAAGGAAAACCTATCCACACATACGATATTTCACACTTCAAGTTGGTCGATGGGAAGTTTTCACCAGATGGAACGTCAATAATACTTTCAGATGATGTGGGCCAACTGTACGTATTAAGCACAGGCCAAGGGGATTCTCAAAAGGACGCTAAATATGATCAGTTTTTCCTGGGGGATTACCGGCCATTAATCCAGGACATATATGGGAATGTCCTTGACCAGGAATCTCAGCTTCCACCTTATCGCCGAAATATGGAGGACCCTCTTTGTGATTCAGCGATGATTCCATATGAAGAGCCATATCAGACCAAGTTTCAGAAACTGCGACTTGGCGCCTTAGGCAAAGAATGGCGACCATCTTCTTTAAAGCTTGCTATAGGGCCAGATATCACTTTAGATCAAGATTACCAAATGCCACCTCTGGCAGATCTAGACTTAGCTGAGCCGATGCCAGAATTTGTAGATGTGATGGAGTGGGAACCAGAAATCGATATCTTAAGCGATGGAAATGACTCCGAATACAATGTGCCAGAAGAGGATTCGTCTGGAAAAGAGCAAGAATGTATAAATTCTTTGACTTCTAGTGAGTCAGGTTCCAGTTCTAGTGGAAGCGATGAGGATGGTGATCATCAGAACAGCCGTAGAAGATCCAAAAGGAGAAAACATAAAACAGGAGCTGAGATCATGACTTCTTCGGGTAGGCGTTTTAGAAAGAGAAACTTTGATGAGCTTGAAGGTGCTACAAGCAAGAACAAACGTACCAGGAAATTCAGGAGTGGTCGTAGAGAATCCAAAAGAAAATCTTCAAAATCTAAATCGTCCAGACCTAGGCGAGCGGCTGCACAAAATGCACTCTCTTGGTTTTCTAAGATTACAGGCACATCTAAAGATGCAGAAGAGGAAGATGTTTCTGAATTGAGCGAGTCATCAGAAAGTGAATCGACAACACAGGACTCAGGCACTGGGGATAGTGAACTTGATGTAGCTTTGGTAAATGGGCATGACAAGCAATCAAAGGGGAAAAACATTCTCGTATGTGATTCAGACGATGGGGCTCAACAGTGTGATGTTAGCGAAACAACTGCTGAACGAAGGAGATTGGTTGTTAGGTTTCCTGTTAAGAGTTCAGATAAGCTTTCCTTGCTGGAGAACCTACCTGGAACATCTTCCCATGCTCCAACTCCAACTTTAGGGATTGGCTGTGCTGAAAACTCAAGGGTTCCTGTGAACTTTGAAGTTTCCACAAATCATTTTAAGGGGTTAGATGCAAGCAAAGTAAAATGGGGAATGGTTAAGGCTCGTACATCAAAGCGAATGAGAAGTGAATCAATGTCATCGCATGGACTTATGGGCTCTGAGCCAGAGGGAAAAGAAAATAATGTTAGCAAAGAGGCAGATCACCATGATAATGGTGTTACAACACCTAATTGTTTGGAATTAAGAACAGATATCGATGGAATTGCAGTTGACACTGACACGGTGCTTTCTAATGGTTTGCCAAATGGTGAGGAACAATGCCTAGGAGTGGATGGGTCGCCAAGTCGAGTGGCTGATGAGGGTGCCTCTAACTGTTCTCAGGATGTAGCAGGTCGCTTGCATGATCTAAAAGATAGCCTTCCACCTATCTCTAGGACGTTGAGGATCCGCTCCAAGTGGGTTTCAAGGGCTCCTGATACATCTTTGAAGCAAGAAGTAAAATCTTCATCAATAAATCAAGAGAATGGTGGCTCTGACGCGTTAAATGATGGTTCTGCAAACACTAAATTGGATTTGGCATTGGACAGCCGAAAGGATGGTGTGGTTGGAACAGAGCTATCTCTGACAAATGATTGTGTGCATGACTCAAATCCGCTGATCAGTGACCCTGTCTCAGTCAGTGACCCTGTCTCAGTTGATGTTCCTGTGTCACATCCTAAACGGATGTTTGATTATGTCTATAGACGAAAGAAGTCACGAAAGCATGAGAATAACTCAGACCGGGGTGATACTCTGACTCAAGAAACAAGTCCAGGTTCGTGTAGTCAGGATCAAAGTAGTGGTGCTAATACCCATGAAGGTGTCCCTAATGGGCTCCATGAGACCGAGTCAAATGGTTTGGAGAAGCCGGAAGGCAGTTTGACACACATCCGAGATAAACTAAGTGATTCACATGGAAAGCATAACTCTCAAGAAGAATGTATATCAACTTCTGGGGCAACACTTCGGTCGAGATCCACAAGGAATAGAAAGTCTACTTATCCTTTCAGTGAAACTAAACCTGTTGAGACAAAGAAGCTTCAGCAGTCGATAGAAAAGGTATCTTGGTTAACATTATCAACACATGAAGAGGGTTCTCGTTATATCCCACAAAAGGGAGATGAGGTTGCTTATTTGCGACAGGGGCATCAAGAATACTTGAACTTCAGCTCCCTGAGGGAAGTGGCTCCTTGGACTTCAGTAAAGGGAGGAAACATAAAGGCGGTGGAGATCTGTAAAGTGGAAAGTCTTGAATACGCAACACTCCCTGGTTCTGGGGATAGCTGCTGCAAAATGATACTTAAAGTCATCGACCCCAACTCCGAAGTGTTCGACAAAACTTTCAAACTGACATTGCCTGAGGTGGTGAGCTTTCCAGATTTTCTTGTGGAAAGAAGTCGGTATGAAGCAGCGATACAGAGGAACTGGACTTTCAGGGATAAGTGTAAGGTTTGGTGGAGAGACGAAGGCGAAGAAGATGGTAATTGGTGGGAAGGACGGATTCTAGCTGTGAAGGCCAAATCACCTGATTTTCCTGATAGTCCGTGGGAGAGGTACACAGTTAGATACAAGAATGATCCGACGGAGACGCATCTTCACAGTCCCTGGGAGCTTTTTGATGCTGATACCAAGTGGGAGCAGCCTCATATGGATGATGAGAAACGAAACCGTCTGCTCTTGGCCTTAACAAAGTTGGAGACTTCAGATAAAAGAACCAAGGATTCTTATGGCCTCCAAAAACTGAACCAGACTGTGGGAAGCTCCAGCTACACTAACAGGTTCCCAGTACTTTTGTCGATTGAAGTAATCAGGTCAAGGCTTGAGAACAACTATTACCGGAGTGTGGAAGCATTAAGACACGACGTAGAAGTTATGCTGTCCAATGCAGAAACTTTCTTTGGTCGAAATAAAAGCGTAGCAGCCAAAATCTCGCGTCTCTCTAAATGGTTCGACCGCACGCTACCTTCTTTGTAG

Protein:   MALRKNTPKADSVSLPMKPLNFSRKLPGNDPDIAQDVVRRNIDLDQREVYFLMLHLLSSGPCQRTYALLRHELLEHELLPRRYHAWYSRSGLPSGDENDDGNSFPLDYAELAKRYSHVKRDHLVELLKQLVFVSSRPTPSRGLADGNKLVTAGVPTLLGTGSFPLLSYDKDIVGSDLKPPPIGMRWPHMHADQVRGLSLREIGGGFARHHRAPSIRAACYVIVKPSTMVQKMQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMETAYCLASCRGHEGDITDLAVNSNNTFIASASNDCVIRVWRLPDGLPVSVLRGHIGAITAIAFSPRPGSPYQLLSSSDDGTCRIWDARGAQFAPRIYVPRPPSPDGKNDGPSSSDAQQSHQIFSCAFNASGSVFVTGSSDTLARVYSVWSASRISNDDPEQPNHEMDVLAGHENDVNYVQFSGCAAGSKFADYSKDDSVPKFKSSWFCHDNIVTCSRDGSAIIWIPRSRRSHGKSYRWTRAYHLKVPPPPMPPQPPRGGPRQRILPTPRGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMSAGYDGKTIVWDIWEGKPIHTYDISHFKLVDGKFSPDGTSIILSDDVGQLYVLSTGQGDSQKDAKYDQFFLGDYRPLIQDIYGNVLDQESQLPPYRRNMEDPLCDSAMIPYEEPYQTKFQKLRLGALGKEWRPSSLKLAIGPDITLDQDYQMPPLADLDLAEPMPEFVDVMEWEPEIDILSDGNDSEYNVPEEDSSGKEQECINSLTSSESGSSSSGSDEDGDHQNSRRRSKRRKHKTGAEIMTSSGRRFRKRNFDELEGATSKNKRTRKFRSGRRESKRKSSKSKSSRPRRAAAQNALSWFSKITGTSKDAEEEDVSELSESSESESTTQDSGTGDSELDVALVNGHDKQSKGKNILVCDSDDGAQQCDVSETXTAERRRLVVRFPVKSSDKLSLLENLPGTSSHAPTPTLGIGCAENSRVPVNFEVSTNHFKGLDASKVKWGMVKARTSKRMRSESMSSHGLMGSEPEGKENNVSKEADHHDNGVTTPNCLELRTDIDGIAVDTDTVLSNGLPNGEEQCLGVDGSPSRVADEGASNCSQDVAGRLHDLKDSLPPISRTLRIRSKWVSRAPDTSLKQEVKSSSINQENGGSDALNDGSANTKLDLALDSRKDGVVGTELSLTNDCVHDSNPLISDPVSVSDPVSVDVPVSHPKRMFDYVYRRKKSRKHENNSDRGDTLTQETSPGSCSQDQSSGANTHEGVPNGLHETESNGLEKPEGSLTHIRDKLSDSHGKHNSQEECISTSGATLRSRSTRNRKSTYPFSETKPVETKKLQQSIEKVSWLTLSTHEEGSRYIPQKGDEVAYLRQGHQEYLNFSSLREVAPWTSVKGGNIKAVEICKVESLEYATLPGSGDSCCKMILKVIDPNSEVFDKTFKLTLPEVVSFPDFLVERSRYEAAIQRNWTFRDKCKVWWRDEGEEDGNWWEGRILAVKAKSPDFPDSPWERYTVRYKNDPTETHLHSPWELFDADTKWEQPHMDDEKRNRLLLALTKLETSDKRTKDSYGLQKLNQTVGSSSYTNRFPVLLSIEVIRSRLENNYYRSVEALRHDVEVMLSNAETFFGRNKSVAAKISRLSKWFDRTLPSL